Probable amino-acid permease transmembrane protein
Organism: Photobacterium angustum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q1ZRX5
Pfam Acc: PF13520
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 10
Sequence positions:
: 13-34|47-62|95-112|212-233|246-262|308-329|352-369|372-390|410-431|433-450
Tilt angles:
- Segment: 13-34 - Tilt: 37.3°
- Segment: 47-62 - Tilt: 4.1°
- Segment: 95-112 - Tilt: 30.9°
- Segment: 212-233 - Tilt: 38.0°
- Segment: 246-262 - Tilt: 7.1°
- Segment: 308-329 - Tilt: 37.7°
- Segment: 352-369 - Tilt: 40.7°
- Segment: 372-390 - Tilt: 31.6°
- Segment: 410-431 - Tilt: 44.4°
- Segment: 433-450 - Tilt: 24.1°
Structural assessment:
MAIDEN score = -88.5939
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]