Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.9 Å
Number of TM segments = 6
Sequence positions:
: 133-156|172-191|211-225|266-283|312-334|340-356
Tilt angles:
- Segment: 133-156 - Tilt: 47.2°
- Segment: 172-191 - Tilt: 37.1°
- Segment: 211-225 - Tilt: 25.3°
- Segment: 266-283 - Tilt: 35.5°
- Segment: 312-334 - Tilt: 28.6°
- Segment: 340-356 - Tilt: 51.2°
Structural assessment:
MAIDEN score = 8.9875
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]