Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 4
Sequence positions:
: 134-161|169-197|215-238|268-291
Tilt angles:
- Segment: 134-161 - Tilt: 41.6°
- Segment: 169-197 - Tilt: 52.8°
- Segment: 215-238 - Tilt: 31.7°
- Segment: 268-291 - Tilt: 35.8°
Structural assessment:
MAIDEN score = -45.9164
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]