Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.8 Å
Number of TM segments = 5
Sequence positions:
: 106-123|133-151|175-194|215-233|268-290
Tilt angles:
- Segment: 106-123 - Tilt: 21.7°
- Segment: 133-151 - Tilt: 13.1°
- Segment: 175-194 - Tilt: 28.4°
- Segment: 215-233 - Tilt: 18.7°
- Segment: 268-290 - Tilt: 39.4°
Structural assessment:
MAIDEN score = -37.4265
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]