Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.1 Å
Number of TM segments = 4
Sequence positions:
: 108-124|127-152|164-201|214-235
Tilt angles:
- Segment: 108-124 - Tilt: 31.2°
- Segment: 127-152 - Tilt: 56.4°
- Segment: 164-201 - Tilt: 67.6°
- Segment: 214-235 - Tilt: 46.6°
Structural assessment:
MAIDEN score = -47.6283
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]