Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 4
Sequence positions:
: 141-156|168-190|214-228|270-286
Tilt angles:
- Segment: 141-156 - Tilt: 42.9°
- Segment: 168-190 - Tilt: 56.5°
- Segment: 214-228 - Tilt: 23.8°
- Segment: 270-286 - Tilt: 40.3°
Structural assessment:
MAIDEN score = -22.2795
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]