Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 5
Sequence positions:
: 106-119|135-148|179-193|218-233|270-287
Tilt angles:
- Segment: 106-119 - Tilt: 29.4°
- Segment: 135-148 - Tilt: 34.2°
- Segment: 179-193 - Tilt: 36.4°
- Segment: 218-233 - Tilt: 8.0°
- Segment: 270-287 - Tilt: 24.8°
Structural assessment:
MAIDEN score = -10.4541
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]