Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 6
Sequence positions:
: 131-158|175-198|207-228|270-290|306-327|340-360
Tilt angles:
- Segment: 131-158 - Tilt: 57.9°
- Segment: 175-198 - Tilt: 37.3°
- Segment: 207-228 - Tilt: 37.4°
- Segment: 270-290 - Tilt: 28.3°
- Segment: 306-327 - Tilt: 36.9°
- Segment: 340-360 - Tilt: 34.4°
Structural assessment:
MAIDEN score = -66.8566
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]