Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.7 Å
Number of TM segments = 6
Sequence positions:
: 131-160|169-197|208-232|266-289|306-327|339-360
Tilt angles:
- Segment: 131-160 - Tilt: 45.4°
- Segment: 169-197 - Tilt: 45.9°
- Segment: 208-232 - Tilt: 29.7°
- Segment: 266-289 - Tilt: 18.5°
- Segment: 306-327 - Tilt: 27.9°
- Segment: 339-360 - Tilt: 29.3°
Structural assessment:
MAIDEN score = -56.2527
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]