Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 6
Sequence positions:
: 129-161|172-201|207-230|269-292|307-330|341-362
Tilt angles:
- Segment: 129-161 - Tilt: 39.8°
- Segment: 172-201 - Tilt: 44.5°
- Segment: 207-230 - Tilt: 33.3°
- Segment: 269-292 - Tilt: 21.0°
- Segment: 307-330 - Tilt: 19.7°
- Segment: 341-362 - Tilt: 21.0°
Structural assessment:
MAIDEN score = -89.8911
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]