Novel 7 transmembrane receptor (Rhodopsin family) proteinNovel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28BQ5
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.3 Å
Number of TM segments = 7
Sequence positions:
: 106-124|129-148|183-201|204-221|277-291|307-321|349-362
Tilt angles:
- Segment: 106-124 - Tilt: 54.0°
- Segment: 129-148 - Tilt: 38.6°
- Segment: 183-201 - Tilt: 43.0°
- Segment: 204-221 - Tilt: 38.9°
- Segment: 277-291 - Tilt: 22.5°
- Segment: 307-321 - Tilt: 23.9°
- Segment: 349-362 - Tilt: 20.4°
Structural assessment:
MAIDEN score = -60.9511
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]