Novel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28H55
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 4
Sequence positions:
: 19-41|49-71|100-124|127-143
Tilt angles:
- Segment: 19-41 - Tilt: 52.5°
- Segment: 49-71 - Tilt: 56.0°
- Segment: 100-124 - Tilt: 44.2°
- Segment: 127-143 - Tilt: 41.7°
Structural assessment:
MAIDEN score = -20.3681
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]