Novel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28H55
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 5
Sequence positions:
: 18-44|49-74|80-119|125-151|184-214
Tilt angles:
- Segment: 18-44 - Tilt: 26.1°
- Segment: 49-74 - Tilt: 44.6°
- Segment: 80-119 - Tilt: 56.6°
- Segment: 125-151 - Tilt: 48.5°
- Segment: 184-214 - Tilt: 49.9°
Structural assessment:
MAIDEN score = -37.9642
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]