Novel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28H55
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
: 23-38|52-69|92-110|132-145|185-199|222-235|271-282
Tilt angles:
- Segment: 23-38 - Tilt: 25.2°
- Segment: 52-69 - Tilt: 41.1°
- Segment: 92-110 - Tilt: 46.8°
- Segment: 132-145 - Tilt: 19.1°
- Segment: 185-199 - Tilt: 40.5°
- Segment: 222-235 - Tilt: 10.8°
- Segment: 271-282 - Tilt: 13.8°
Structural assessment:
MAIDEN score = -28.3431
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]