Novel 7 transmembrane receptor (Rhodopsin family) protein
Organism: Xenopus tropicalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q28H55
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 5
Sequence positions:
: 20-41|49-66|97-114|129-145|186-201
Tilt angles:
- Segment: 20-41 - Tilt: 55.2°
- Segment: 49-66 - Tilt: 44.5°
- Segment: 97-114 - Tilt: 38.1°
- Segment: 129-145 - Tilt: 34.9°
- Segment: 186-201 - Tilt: 18.5°
Structural assessment:
MAIDEN score = -36.1695
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]