Integral transmembrane protein
Organism: Shigella boydii
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q31W02
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 12
Sequence positions:
: 14-30|337-354|368-388|393-409|443-458|467-484|540-556|871-887|900-918|925-941|977-991|999-1017
Tilt angles:
- Segment: 14-30 - Tilt: 12.0°
- Segment: 337-354 - Tilt: 25.3°
- Segment: 368-388 - Tilt: 31.2°
- Segment: 393-409 - Tilt: 7.4°
- Segment: 443-458 - Tilt: 14.0°
- Segment: 467-484 - Tilt: 29.0°
- Segment: 540-556 - Tilt: 13.5°
- Segment: 871-887 - Tilt: 6.5°
- Segment: 900-918 - Tilt: 43.8°
- Segment: 925-941 - Tilt: 18.4°
- Segment: 977-991 - Tilt: 24.7°
- Segment: 999-1017 - Tilt: 36.6°
Structural assessment:
MAIDEN score = -117.7658
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]