Transmembrane channel protein
Organism: Brassica oleracea
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q39383
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.5 Å
Number of TM segments = 6
Sequence positions:
: 47-75|82-106|108-153|174-196|210-245|255-276
Tilt angles:
- Segment: 47-75 - Tilt: 47.7°
- Segment: 82-106 - Tilt: 39.4°
- Segment: 108-153 - Tilt: 24.1°
- Segment: 174-196 - Tilt: 16.9°
- Segment: 210-245 - Tilt: 22.0°
- Segment: 255-276 - Tilt: 30.6°
Structural assessment:
MAIDEN score = -58.2283
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]