Putative transmembrane transporter protein
Organism: Burkholderia pseudomallei
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q3JVS3
Pfam Acc: PF05425
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 7
Sequence positions:
: 107-124|126-143|145-157|163-178|194-208|241-252|279-291
Tilt angles:
- Segment: 107-124 - Tilt: 58.9°
- Segment: 126-143 - Tilt: 50.9°
- Segment: 145-157 - Tilt: 44.2°
- Segment: 163-178 - Tilt: 45.7°
- Segment: 194-208 - Tilt: 50.8°
- Segment: 241-252 - Tilt: 7.4°
- Segment: 279-291 - Tilt: 33.2°
Structural assessment:
MAIDEN score = -8.8967
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]