Sema domain, transmembrane domain (TM), and cytoplasmic domain, (Semaphorin) 6B
Organism: Mus musculus
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q3UTK5
Pfam Acc: PF01403
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
A: 32-46|106-117|124-135|190-198|428-435
Tilt angles:
A - Segment: 32-46 - Tilt: 50.0°
A - Segment: 106-117 - Tilt: 22.0°
A - Segment: 124-135 - Tilt: 53.0°
A - Segment: 190-198 - Tilt: 28.5°
A - Segment: 428-435 - Tilt: 31.6°
Structural assessment:
MAIDEN score = 2.0692
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]