Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 precursor
Organism: Danio rerio
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q504C1
Pfam Acc: PF13855
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 8
Sequence positions:
: 58-64|66-77|104-112|117-126|130-136|140-149|154-160|162-171
Tilt angles:
- Segment: 58-64 - Tilt: 6.4°
- Segment: 66-77 - Tilt: 18.8°
- Segment: 104-112 - Tilt: 22.5°
- Segment: 117-126 - Tilt: 13.5°
- Segment: 130-136 - Tilt: 10.3°
- Segment: 140-149 - Tilt: 28.9°
- Segment: 154-160 - Tilt: 11.0°
- Segment: 162-171 - Tilt: 35.7°
Structural assessment:
MAIDEN score = 43.3027
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]