Putative transmembrane water channel
Organism: Nocardia farcinica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q5YZZ9
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.8 Å
Number of TM segments = 2
Sequence positions:
: 136-178|180-214
Tilt angles:
- Segment: 136-178 - Tilt: 58.4°
- Segment: 180-214 - Tilt: 36.8°
Structural assessment:
MAIDEN score = -27.3900
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]