Transmembrane efflux pump
Organism: Leifsonia xyli
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q6AFX2
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.8 Å
Number of TM segments = 9
Sequence positions:
: 109-125|128-149|171-194|243-279|297-318|326-346|349-381|383-404|420-442
Tilt angles:
- Segment: 109-125 - Tilt: 14.4°
- Segment: 128-149 - Tilt: 43.0°
- Segment: 171-194 - Tilt: 50.7°
- Segment: 243-279 - Tilt: 45.1°
- Segment: 297-318 - Tilt: 26.5°
- Segment: 326-346 - Tilt: 42.6°
- Segment: 349-381 - Tilt: 58.8°
- Segment: 383-404 - Tilt: 38.7°
- Segment: 420-442 - Tilt: 36.9°
Structural assessment:
MAIDEN score = -31.6189
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]