Hypothetical drug transport transmembrane protein
Organism: Photobacterium profundum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q6LQY6
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 12
Sequence positions:
: 6-29|41-62|68-91|97-119|135-156|165-185|215-239|249-272|275-296|300-323|340-361|366-387
Tilt angles:
- Segment: 6-29 - Tilt: 35.8°
- Segment: 41-62 - Tilt: 27.1°
- Segment: 68-91 - Tilt: 7.2°
- Segment: 97-119 - Tilt: 23.7°
- Segment: 135-156 - Tilt: 18.7°
- Segment: 165-185 - Tilt: 19.7°
- Segment: 215-239 - Tilt: 27.4°
- Segment: 249-272 - Tilt: 22.6°
- Segment: 275-296 - Tilt: 5.4°
- Segment: 300-323 - Tilt: 21.5°
- Segment: 340-361 - Tilt: 18.4°
- Segment: 366-387 - Tilt: 10.1°
Structural assessment:
MAIDEN score = -29.8888
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]