Hypothetical transmembrane protein
Organism: Mycoplasma mycoides
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q6MTD5
Pfam Acc: PF02355
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 3
Sequence positions:
: 59-76|108-123|125-159
Tilt angles:
- Segment: 59-76 - Tilt: 52.8°
- Segment: 108-123 - Tilt: 51.8°
- Segment: 125-159 - Tilt: 68.5°
Structural assessment:
MAIDEN score = -20.0703
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]