Putative transmembrane transport protein
Organism: Rhodopseudomonas palustris
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q6N957
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 12
Sequence positions:
: 13-36|49-72|75-93|101-120|140-164|170-188|215-242|252-280|283-303|308-332|344-366|376-397
Tilt angles:
- Segment: 13-36 - Tilt: 30.8°
- Segment: 49-72 - Tilt: 27.5°
- Segment: 75-93 - Tilt: 3.9°
- Segment: 101-120 - Tilt: 21.6°
- Segment: 140-164 - Tilt: 21.1°
- Segment: 170-188 - Tilt: 14.0°
- Segment: 215-242 - Tilt: 37.4°
- Segment: 252-280 - Tilt: 34.0°
- Segment: 283-303 - Tilt: 6.1°
- Segment: 308-332 - Tilt: 33.9°
- Segment: 344-366 - Tilt: 6.5°
- Segment: 376-397 - Tilt: 22.4°
Structural assessment:
MAIDEN score = -8.6789
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]