Putative transmembrane transport protein
Organism: Rhodopseudomonas palustris
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q6N957
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 12
Sequence positions:
: 16-33|54-72|77-94|107-124|141-159|173-191|215-239|256-277|283-299|311-332|344-361|379-397
Tilt angles:
- Segment: 16-33 - Tilt: 24.6°
- Segment: 54-72 - Tilt: 25.1°
- Segment: 77-94 - Tilt: 6.6°
- Segment: 107-124 - Tilt: 19.5°
- Segment: 141-159 - Tilt: 25.6°
- Segment: 173-191 - Tilt: 11.8°
- Segment: 215-239 - Tilt: 39.9°
- Segment: 256-277 - Tilt: 37.7°
- Segment: 283-299 - Tilt: 11.4°
- Segment: 311-332 - Tilt: 41.6°
- Segment: 344-361 - Tilt: 11.9°
- Segment: 379-397 - Tilt: 23.0°
Structural assessment:
MAIDEN score = -45.3593
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]