Fasciclin II transmembrane protein isoform
Organism: Rattus norvegicus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q6RKB3
Pfam Acc: PF00041
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
: 21-33|88-98|102-112|114-128|220-244
Tilt angles:
- Segment: 21-33 - Tilt: 60.9°
- Segment: 88-98 - Tilt: 61.3°
- Segment: 102-112 - Tilt: 61.5°
- Segment: 114-128 - Tilt: 64.4°
- Segment: 220-244 - Tilt: 10.0°
Structural assessment:
MAIDEN score = 53.2436
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]