Envelope glycoprotein gp160 precursor
Organism: Human immunodeficiency virus type 1 group M subtype C
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q75008
Pfam Acc: PF00516
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 124-134|146-162|279-285|406-414|420-426|437-476
Tilt angles:
- Segment: 124-134 - Tilt: 39.0°
- Segment: 146-162 - Tilt: 67.9°
- Segment: 279-285 - Tilt: 23.8°
- Segment: 406-414 - Tilt: 29.3°
- Segment: 420-426 - Tilt: 17.7°
- Segment: 437-476 - Tilt: 41.4°
Structural assessment:
MAIDEN score = 34.7676
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]