Probable transmembrane transport protein
Organism: Chromobacterium violaceum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q7NTP0
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 12
Sequence positions:
: 7-29|45-67|70-88|98-117|134-151|165-183|211-231|239-258|270-289|296-317|334-353|361-380
Tilt angles:
- Segment: 7-29 - Tilt: 32.8°
- Segment: 45-67 - Tilt: 38.5°
- Segment: 70-88 - Tilt: 18.0°
- Segment: 98-117 - Tilt: 14.4°
- Segment: 134-151 - Tilt: 10.7°
- Segment: 165-183 - Tilt: 22.3°
- Segment: 211-231 - Tilt: 36.7°
- Segment: 239-258 - Tilt: 12.8°
- Segment: 270-289 - Tilt: 12.5°
- Segment: 296-317 - Tilt: 34.9°
- Segment: 334-353 - Tilt: 22.6°
- Segment: 361-380 - Tilt: 3.1°
Structural assessment:
MAIDEN score = -23.3099
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]