Probable amino-acid permease transmembrane protein
Organism: Chromobacterium violaceum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q7NZQ0
Pfam Acc: PF13520
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 8
Sequence positions:
: 51-63|101-115|141-153|160-181|213-226|246-258|303-318|416-430
Tilt angles:
- Segment: 51-63 - Tilt: 6.6°
- Segment: 101-115 - Tilt: 36.3°
- Segment: 141-153 - Tilt: 39.5°
- Segment: 160-181 - Tilt: 45.7°
- Segment: 213-226 - Tilt: 36.7°
- Segment: 246-258 - Tilt: 7.0°
- Segment: 303-318 - Tilt: 39.6°
- Segment: 416-430 - Tilt: 55.3°
Structural assessment:
MAIDEN score = -18.4141
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]