Probable amino-acid permease transmembrane protein
Organism: Chromobacterium violaceum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q7NZQ0
Pfam Acc: PF13520
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.4 Å
Number of TM segments = 10
Sequence positions:
: 21-37|48-63|98-118|140-154|164-186|209-226|247-262|300-318|409-427|431-447
Tilt angles:
- Segment: 21-37 - Tilt: 18.0°
- Segment: 48-63 - Tilt: 11.6°
- Segment: 98-118 - Tilt: 51.6°
- Segment: 140-154 - Tilt: 14.3°
- Segment: 164-186 - Tilt: 42.0°
- Segment: 209-226 - Tilt: 29.8°
- Segment: 247-262 - Tilt: 13.6°
- Segment: 300-318 - Tilt: 41.0°
- Segment: 409-427 - Tilt: 39.3°
- Segment: 431-447 - Tilt: 21.4°
Structural assessment:
MAIDEN score = -88.9404
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]