Probable transmembrane transport protein
Organism: Rhodopirellula baltica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q7UE09
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 66-79|98-110|122-139|158-170|195-208|248-268|302-318|328-339|359-372|392-405|427-442
Tilt angles:
- Segment: 66-79 - Tilt: 17.4°
- Segment: 98-110 - Tilt: 2.8°
- Segment: 122-139 - Tilt: 45.5°
- Segment: 158-170 - Tilt: 11.1°
- Segment: 195-208 - Tilt: 25.8°
- Segment: 248-268 - Tilt: 46.7°
- Segment: 302-318 - Tilt: 44.2°
- Segment: 328-339 - Tilt: 15.7°
- Segment: 359-372 - Tilt: 32.5°
- Segment: 392-405 - Tilt: 16.5°
- Segment: 427-442 - Tilt: 20.3°
Structural assessment:
MAIDEN score = -16.0601
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]