Putative transmembrane efflux protein
Organism: Bordetella parapertussis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q7WAM9
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 227-246|267-291|296-308|315-325|339-350|355-366
Tilt angles:
- Segment: 227-246 - Tilt: 64.3°
- Segment: 267-291 - Tilt: 53.7°
- Segment: 296-308 - Tilt: 0.4°
- Segment: 315-325 - Tilt: 29.1°
- Segment: 339-350 - Tilt: 31.8°
- Segment: 355-366 - Tilt: 15.6°
Structural assessment:
MAIDEN score = -15.3797
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]