Putative transmembrane efflux protein
Organism: Streptomyces avermitilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q826Z5
Pfam Acc: PF05977
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.5 Å
Number of TM segments = 12
Sequence positions:
: 29-47|63-81|89-108|121-139|157-173|187-203|236-256|272-289|297-314|323-343|361-377|389-404
Tilt angles:
- Segment: 29-47 - Tilt: 24.7°
- Segment: 63-81 - Tilt: 24.3°
- Segment: 89-108 - Tilt: 7.7°
- Segment: 121-139 - Tilt: 21.3°
- Segment: 157-173 - Tilt: 17.5°
- Segment: 187-203 - Tilt: 25.3°
- Segment: 236-256 - Tilt: 37.7°
- Segment: 272-289 - Tilt: 30.2°
- Segment: 297-314 - Tilt: 1.8°
- Segment: 323-343 - Tilt: 32.0°
- Segment: 361-377 - Tilt: 10.0°
- Segment: 389-404 - Tilt: 15.6°
Structural assessment:
MAIDEN score = -7.7655
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]