Putative transmembrane efflux protein
Organism: Streptomyces avermitilis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q827J8
Pfam Acc: PF11700
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 9
Sequence positions:
: 104-121|131-148|169-194|196-210|242-278|286-310|320-337|343-373|377-397
Tilt angles:
- Segment: 104-121 - Tilt: 31.0°
- Segment: 131-148 - Tilt: 16.7°
- Segment: 169-194 - Tilt: 44.4°
- Segment: 196-210 - Tilt: 18.4°
- Segment: 242-278 - Tilt: 51.3°
- Segment: 286-310 - Tilt: 40.9°
- Segment: 320-337 - Tilt: 34.5°
- Segment: 343-373 - Tilt: 57.3°
- Segment: 377-397 - Tilt: 33.8°
Structural assessment:
MAIDEN score = -5.3234
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]