Probable transmembrane protein
Organism: Nitrosomonas europaea
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q82WR2
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 9
Sequence positions:
: 37-54|56-71|92-104|123-138|164-184|219-236|258-272|287-299|309-323
Tilt angles:
- Segment: 37-54 - Tilt: 45.9°
- Segment: 56-71 - Tilt: 32.3°
- Segment: 92-104 - Tilt: 28.2°
- Segment: 123-138 - Tilt: 16.0°
- Segment: 164-184 - Tilt: 16.9°
- Segment: 219-236 - Tilt: 46.3°
- Segment: 258-272 - Tilt: 21.1°
- Segment: 287-299 - Tilt: 7.9°
- Segment: 309-323 - Tilt: 45.2°
Structural assessment:
MAIDEN score = 1.6797
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]