Leucine-rich repeat transmembrane neuronal protein 1 precursor
Organism: Homo sapiens
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q86UE6
Pfam Acc: PF13855
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
A: 80-91|93-99|104-113|115-123|129-137|139-147|176-185|187-195|200-208|213-219|224-232
Tilt angles:
A - Segment: 80-91 - Tilt: 4.8°
A - Segment: 93-99 - Tilt: 20.8°
A - Segment: 104-113 - Tilt: 19.5°
A - Segment: 115-123 - Tilt: 34.2°
A - Segment: 129-137 - Tilt: 21.6°
A - Segment: 139-147 - Tilt: 33.4°
A - Segment: 176-185 - Tilt: 18.4°
A - Segment: 187-195 - Tilt: 30.4°
A - Segment: 200-208 - Tilt: 19.7°
A - Segment: 213-219 - Tilt: 15.6°
A - Segment: 224-232 - Tilt: 17.5°
Structural assessment:
MAIDEN score = 48.2552
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]