Putative drug transport transmembrane protein
Organism: Vibrio parahaemolyticus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q87GY1
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 11
Sequence positions:
: 49-64|70-82|109-122|136-150|165-179|210-229|246-260|275-289|300-314|334-348|367-380
Tilt angles:
- Segment: 49-64 - Tilt: 32.0°
- Segment: 70-82 - Tilt: 23.6°
- Segment: 109-122 - Tilt: 23.9°
- Segment: 136-150 - Tilt: 20.2°
- Segment: 165-179 - Tilt: 26.2°
- Segment: 210-229 - Tilt: 37.8°
- Segment: 246-260 - Tilt: 20.7°
- Segment: 275-289 - Tilt: 17.2°
- Segment: 300-314 - Tilt: 37.1°
- Segment: 334-348 - Tilt: 20.9°
- Segment: 367-380 - Tilt: 16.3°
Structural assessment:
MAIDEN score = -51.4117
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]