Putative methyl-accepting chemotaxis transmembrane protein
Organism: Vibrio parahaemolyticus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q87MS2
Pfam Acc: PF17201
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 4
Sequence positions:
: 482-496|505-539|541-580|610-663
Tilt angles:
- Segment: 482-496 - Tilt: 33.3°
- Segment: 505-539 - Tilt: 72.1°
- Segment: 541-580 - Tilt: 74.4°
- Segment: 610-663 - Tilt: 76.5°
Structural assessment:
MAIDEN score = -27.4182
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]