Probably transmembrane protein
Organism: Clostridium tetani
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q891V4
Pfam Acc: PF04932
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
: 154-181|183-191|280-290|303-313|335-344
Tilt angles:
- Segment: 154-181 - Tilt: 16.5°
- Segment: 183-191 - Tilt: 35.4°
- Segment: 280-290 - Tilt: 38.2°
- Segment: 303-313 - Tilt: 20.3°
- Segment: 335-344 - Tilt: 42.8°
Structural assessment:
MAIDEN score = 0.5976
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]