Novel 7 transmembrane receptor (Rhodopsin family)
Organism: Danio rerio
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8AW57
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 5
Sequence positions:
: 8-23|42-65|79-133|150-165|192-205
Tilt angles:
- Segment: 8-23 - Tilt: 26.4°
- Segment: 42-65 - Tilt: 52.0°
- Segment: 79-133 - Tilt: 67.1°
- Segment: 150-165 - Tilt: 23.8°
- Segment: 192-205 - Tilt: 24.7°
Structural assessment:
MAIDEN score = 3.3055
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]