Novel 7 transmembrane receptor (Rhodopsin family)
Organism: Danio rerio
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8AW57
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 41-59|88-109|114-124|136-140|157-172|186-201
Tilt angles:
- Segment: 41-59 - Tilt: 50.5°
- Segment: 88-109 - Tilt: 56.7°
- Segment: 114-124 - Tilt: 44.1°
- Segment: 136-140 - Tilt: 24.1°
- Segment: 157-172 - Tilt: 28.4°
- Segment: 186-201 - Tilt: 39.9°
Structural assessment:
MAIDEN score = 25.6625
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]