Novel 7 transmembrane receptor (Rhodopsin family)
Organism: Danio rerio
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8AW57
Pfam Acc: PF00001
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.0 Å
Number of TM segments = 4
Sequence positions:
: 39-65|79-109|148-172|186-208
Tilt angles:
- Segment: 39-65 - Tilt: 24.5°
- Segment: 79-109 - Tilt: 35.9°
- Segment: 148-172 - Tilt: 22.7°
- Segment: 186-208 - Tilt: 14.1°
Structural assessment:
MAIDEN score = -40.1229
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]