Hypothetical transmembrane protein possibly involved in uptake or efflux
Organism: Bifidobacterium longum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8G4V4
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 82-98|171-196|242-272|276-295|359-373|378-407
Tilt angles:
- Segment: 82-98 - Tilt: 47.0°
- Segment: 171-196 - Tilt: 56.4°
- Segment: 242-272 - Tilt: 62.2°
- Segment: 276-295 - Tilt: 48.7°
- Segment: 359-373 - Tilt: 36.2°
- Segment: 378-407 - Tilt: 8.8°
Structural assessment:
MAIDEN score = 72.6947
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]