Novel ubiquitin
Organism: Danio rerio
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8JFU2
Pfam Acc: PF00240
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 3
Sequence positions:
: 138-144|146-154|156-167
Tilt angles:
- Segment: 138-144 - Tilt: 18.3°
- Segment: 146-154 - Tilt: 42.3°
- Segment: 156-167 - Tilt: 38.0°
Structural assessment:
MAIDEN score = 10.3964
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]