Leucine-rich repeat transmembrane neuronal protein 1 precursor
Organism: Mus musculus
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8K377
Pfam Acc: PF13855
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 10
Sequence positions:
C: 128-136|139-145|151-160|163-169|175-184|189-195|197-207|213-219|221-230|336-345
Tilt angles:
C - Segment: 128-136 - Tilt: 30.2°
C - Segment: 139-145 - Tilt: 26.2°
C - Segment: 151-160 - Tilt: 34.2°
C - Segment: 163-169 - Tilt: 27.4°
C - Segment: 175-184 - Tilt: 33.4°
C - Segment: 189-195 - Tilt: 9.0°
C - Segment: 197-207 - Tilt: 23.6°
C - Segment: 213-219 - Tilt: 13.9°
C - Segment: 221-230 - Tilt: 18.5°
C - Segment: 336-345 - Tilt: 43.8°
Structural assessment:
MAIDEN score = 34.9427
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]