Transmembrane transport protein
Organism: Xanthomonas campestris
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8P7F1
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 52-66|83-96|112-129|146-157|174-187|227-238|262-276|287-300|317-328|352-365|382-395
Tilt angles:
- Segment: 52-66 - Tilt: 24.9°
- Segment: 83-96 - Tilt: 19.6°
- Segment: 112-129 - Tilt: 46.7°
- Segment: 146-157 - Tilt: 7.4°
- Segment: 174-187 - Tilt: 14.7°
- Segment: 227-238 - Tilt: 30.8°
- Segment: 262-276 - Tilt: 31.5°
- Segment: 287-300 - Tilt: 21.2°
- Segment: 317-328 - Tilt: 9.5°
- Segment: 352-365 - Tilt: 24.8°
- Segment: 382-395 - Tilt: 35.4°
Structural assessment:
MAIDEN score = -20.0445
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]