Transmembrane efflux protein
Organism: Methanosarcina acetivorans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8TMZ1
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 10
Sequence positions:
: 44-58|76-88|100-121|132-146|162-176|208-216|262-269|280-297|384-398|411-426
Tilt angles:
- Segment: 44-58 - Tilt: 19.7°
- Segment: 76-88 - Tilt: 15.9°
- Segment: 100-121 - Tilt: 58.7°
- Segment: 132-146 - Tilt: 27.9°
- Segment: 162-176 - Tilt: 32.1°
- Segment: 208-216 - Tilt: 53.2°
- Segment: 262-269 - Tilt: 37.8°
- Segment: 280-297 - Tilt: 43.3°
- Segment: 384-398 - Tilt: 32.5°
- Segment: 411-426 - Tilt: 29.5°
Structural assessment:
MAIDEN score = 8.5368
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]