Transmembrane transport protein (DitE-like protein)
Organism: Methanosarcina acetivorans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8TT24
Pfam Acc: PF05977
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 9
Sequence positions:
: 23-40|51-72|84-104|108-125|211-250|253-272|288-309|313-343|346-365
Tilt angles:
- Segment: 23-40 - Tilt: 29.0°
- Segment: 51-72 - Tilt: 38.1°
- Segment: 84-104 - Tilt: 31.2°
- Segment: 108-125 - Tilt: 35.1°
- Segment: 211-250 - Tilt: 62.7°
- Segment: 253-272 - Tilt: 31.6°
- Segment: 288-309 - Tilt: 43.8°
- Segment: 313-343 - Tilt: 61.9°
- Segment: 346-365 - Tilt: 42.1°
Structural assessment:
MAIDEN score = -14.5363
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]