AT5g08500/MAH20_6
Organism: Arabidopsis thaliana
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: Q8VZJ5
Pfam Acc: PF05602
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 74-85|89-104|116-122|174-183|233-241|278-285
Tilt angles:
- Segment: 74-85 - Tilt: 53.5°
- Segment: 89-104 - Tilt: 60.5°
- Segment: 116-122 - Tilt: 28.0°
- Segment: 174-183 - Tilt: 35.3°
- Segment: 233-241 - Tilt: 38.0°
- Segment: 278-285 - Tilt: 27.0°
Structural assessment:
MAIDEN score = 20.2492
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]